{"status": "success", "timestamp": 1785369114, "cases": [{"date_of_birth": "2005-11-10", "sectioning_plane": "coronal", "weight": 345, "memo": "This animal was part of a study on the connections of marmoset caudal prefrontal cortex, focused on subdivisions of area 8.", "survival_days": 10, "perfusion_date": "2007-06-01", "injection_date": "2007-05-22", "id": "CJ74", "sex": "M"}, {"date_of_birth": "2005-11-09", "sectioning_plane": "coronal", "weight": 329, "memo": "Case discussed in detail in Majka et al. (2016; J Comp Neurol 524:2161\u20132181) as one in which there is significant discrepancy in the location of injection site as estimated by manual and automated reconstruction methods. Note discrepancy between yellow circles in flat map (small circle is the visual estimate by an expert neuroanatomist; large circle is the estimate by the automated procedure). This indicates that the sections deviated significantly from a coronal stereotaxic plane.", "survival_days": 14, "perfusion_date": "2008-05-06", "injection_date": "2008-04-22", "id": "CJ83", "sex": "F"}, {"date_of_birth": "2007-01-19", "sectioning_plane": "coronal", "weight": 349, "memo": "This animal was part of a project on the connections of caudal dorsolateral prefrontal cortex (area 8)", "survival_days": 16, "perfusion_date": "2010-03-04", "injection_date": "2010-02-16", "id": "CJ108", "sex": "M"}, {"date_of_birth": "2005-10-15", "sectioning_plane": "coronal", "weight": 419, "memo": "Note: injections were in left hemisphere, images are flipped for consistency with other cases.\n\nPart of the right hemisphere was removed immediately prior to perfusion to obtain material for an attempted brain slice experiment.", "survival_days": 15, "perfusion_date": "2008-03-05", "injection_date": "2008-02-19", "id": "CJ81", "sex": "F"}, {"date_of_birth": "2005-11-10", "sectioning_plane": "coronal", "weight": 394, "memo": "This animal was part of a study aimed at the connections of the primary motor area (Burman et al. 2014; J Comp Neurol 522:811\u2013843). Thalamic label show in Figure 2 of this paper.", "survival_days": 14, "perfusion_date": "2007-11-29", "injection_date": "2007-11-15", "id": "CJ78", "sex": "M"}, {"date_of_birth": "2007-06-26", "sectioning_plane": "coronal", "weight": 377, "memo": "Note: injections were in left hemisphere, images are flipped for consistency with other cases.", "survival_days": 17, "perfusion_date": "2010-08-13", "injection_date": "2010-07-27", "id": "CJ112", "sex": "M"}, {"date_of_birth": "2005-10-14", "sectioning_plane": "coronal", "weight": 375, "memo": "This case attempted to create a series of injections in area V1, exploring the connections of central and peripheral visual field representations. Part of the right hemisphere was removed immediately prior to perfusion to obtain material for an attempted brain slice experiment. \nNote: injections were in left hemisphere, images are flipped for consistency with other cases.", "survival_days": 15, "perfusion_date": "2008-03-12", "injection_date": "2008-02-26", "id": "CJ82", "sex": "F"}, {"date_of_birth": "2002-01-02", "sectioning_plane": "coronal", "weight": 386, "memo": "This animal had 4 injections in the posterior parietal region.", "survival_days": 15, "perfusion_date": "2005-11-13", "injection_date": "2005-10-29", "id": "CJ55", "sex": "F"}, {"date_of_birth": "2005-10-18", "sectioning_plane": "coronal", "weight": 350, "memo": "This case yielded a single useful injection (DY). Other injections did not result in transport.", "survival_days": 15, "perfusion_date": "2009-10-30", "injection_date": "2009-10-15", "id": "CJ102X", "sex": "F"}, {"date_of_birth": "2012-04-11", "sectioning_plane": "coronal", "weight": 301, "memo": "This animal had different injections in  the two hemispheres (FB in right, DY and FR in left). Because the reconstruction of each hemisphere is run separately, this appears here as two cases (CJ146R and CJ146L). Sections from left hemisphere have been flipped horizontally to preserve the common format of all cases and facilitate comparisons.\n\nAn electrophysiological experiment using an \"Utah\" multilectrode array was also conducted. Tracks can be observed (see e.g. sections r46a/ b).\n\nWe experienced problems during sectioning of the caudal block, so histology at some caudal levels is suboptimal, in particular with tears in the white matter.", "survival_days": 16, "perfusion_date": "2014-05-22", "injection_date": "2014-05-06", "id": "CJ146", "sex": "M"}, {"date_of_birth": "2012-04-11", "sectioning_plane": "coronal", "weight": 301, "memo": "This animal had different injections in  the two hemispheres (FB in right, DY and FR in left). Because the reconstruction of each hemisphere is run separately, this appears here as two cases (CJ146R and CJ146L). Sections from left hemisphere have been flipped horizontally to preserve the common format of all cases and facilitate comparisons.\n\nAn electrophysiological experiment using an \"Utah\" multilectrode array was also conducted. Tracks can be observed (see e.g. sections r46a/ b).\n\nWe experienced problems during sectioning of the caudal block, so histology at some caudal levels is suboptimal, in particular with tears in the white matter.", "survival_days": 16, "perfusion_date": "2014-05-22", "injection_date": "2014-05-06", "id": "CJ146L", "sex": "M"}, {"date_of_birth": "2014-07-06", "sectioning_plane": "coronal", "weight": 344, "memo": "This animal was part of a study of prefrontal cortex connections, but also had an attempted injection in the peripheral representation of V1.", "survival_days": 18, "perfusion_date": "2016-10-21", "injection_date": "2016-10-03", "id": "CJ178", "sex": "F"}, {"date_of_birth": "2000-03-19", "sectioning_plane": "coronal", "weight": 395, "memo": "Animal with injections in the ventral part of the occipitoparietal transition cortex.", "survival_days": 10, "perfusion_date": "2003-03-14", "injection_date": "2003-03-04", "id": "CJ50", "sex": "M"}, {"date_of_birth": "1996-06-18", "sectioning_plane": "sagittal", "weight": 361, "memo": "This is an early case in which injections were combined with electrophysiology (see Figs. 13, 15 in Rosa and Tweedale 2000; J Comp Neurol 422: 621-651). Plots of labeled neurons were obtained for every second section (1 in 400 \u00b5m).\nThis case had damage near the midline (visible in sections 1-5) caused by a large injection of a third tracer (Fluorogold). This injection was not reconstructed electronically, but a manual record is available (Fig. 16 in the paper above). \nRegistration of the V1/ V2 border was not optimal but the comparison of automated and expert-based distributions of labeled neurons to areas (compare with Rosa and Tweedale 2000) indicates that the results of the automated procedure are reliable throughout most, if not all of the labeled regions.", "survival_days": 14, "perfusion_date": "1999-09-12", "injection_date": "1999-08-29", "id": "CJ21", "sex": "F"}, {"date_of_birth": "2001-01-25", "sectioning_plane": "coronal", "weight": 368, "memo": "Note: injections were in left hemisphere, images are flipped for consistency with other cases.\n\nThis case underwent a microsimulation experiment, so electrode tracks can be seen within and around the premotor areas.\n\nQuality of Nissl stain is poor in some frontal sections, which led to suboptimal registration to the template in the anterior temporal cortex. In particular, parcellation in sections r10a and r10b was partially removed as the low quality of staining in these regions precluded accurate registration. However, this has not affected assignment of neurons to areas since there were no labelled cells in the anterior temporal cortex.", "survival_days": 16, "perfusion_date": "2003-06-05", "injection_date": "2003-05-20", "id": "CJ52X", "sex": "M"}, {"date_of_birth": "2005-12-06", "sectioning_plane": "coronal", "weight": 397, "memo": "Animal with multiple injections in the caudal part of the frontal lobe.", "survival_days": 14, "perfusion_date": "2009-03-17", "injection_date": "2009-03-03", "id": "CJ94", "sex": "F"}, {"date_of_birth": "2007-02-16", "sectioning_plane": "coronal", "weight": 333, "memo": "This animal had 2 tracer injections (FE and FR) in the dorsolateral surface of the caudal frontal cortex.", "survival_days": 17, "perfusion_date": "2011-11-04", "injection_date": "2011-10-18", "id": "CJ125X", "sex": "F"}, {"date_of_birth": "2000-04-06", "sectioning_plane": "coronal", "weight": 388, "memo": "Likely small involvement of inferior parietal area PG as suggested by label in posterior cingulate and orbitofrontal areas.", "survival_days": 6, "perfusion_date": "2003-04-14", "injection_date": "2003-04-08", "id": "CJ51", "sex": "M"}, {"date_of_birth": "2003-11-07", "sectioning_plane": "coronal", "weight": 395, "memo": "Note: injections were in left hemisphere, images are flipped for consistency with other cases.", "survival_days": 9, "perfusion_date": "2008-06-12", "injection_date": "2008-06-03", "id": "CJ84", "sex": "F"}, {"date_of_birth": "2002-11-07", "sectioning_plane": "coronal", "weight": 350, "memo": "Animal with injections in the caudal temporal lobe, as part of a study of connections of area MT. The process of registration to the template in this case employed an early version of the computational pipeline, which did not use area label maps as constraints; hence, caution is advised in interpreting fine details with reference to proposed area boundaries. also noticeable are histological artefacts which led to damage to the Nissl stained sections in the caudal block.", "survival_days": 14, "perfusion_date": "2004-06-01", "injection_date": "2004-05-18", "id": "CJ56", "sex": "M"}, {"date_of_birth": "1994-04-08", "sectioning_plane": "sagittal", "weight": 350, "memo": "CJ19 was one of the first neuroanatomical tracing cases from the Rosa laboratory. At that stage we were very much in the process of learning how to process marmoset brain tissue, so the histology was...sub-optimal. There are no Nissls available, and an attempt at a gold chloride myelin stain (sections illustrated) is all that remained.\nThe cell plots in this case were performed manually using a camera lucida. Some of the original pencil plots are shown (sections m16a-16g). \nThe registration to a template in this case was based on the brain external morphology only, since the histology was not compatible with the pipeline described by Majka et al. (2016; J Comp Neurol 524:2161\u20132181). Nonetheless, assignment of cells in the cortex to areas correlates very well with manual expert assessment, so the flat maps presented appear accurate.\nThe survival time (3 days) albeit short in comparison with later cases was well sufficient to result in clearly labeled cell bodies from both tracers.", "survival_days": 3, "perfusion_date": "1996-05-02", "injection_date": "1996-04-29", "id": "CJ19", "sex": "M"}, {"date_of_birth": "2014-05-25", "sectioning_plane": "coronal", "weight": 304, "memo": "This animal had 3 good injections in the medial frontal cortex", "survival_days": 17, "perfusion_date": "2015-12-10", "injection_date": "2015-11-23", "id": "CJ164", "sex": "F"}, {"date_of_birth": "1996-06-27", "sectioning_plane": "sagittal", "weight": 310, "memo": "In this case the FB labeled neurones were plotted in every second section, whereas the FR labeled neurones were plotted for every section.\nThe  parcellation into anatomical structures should be considered approximate in sections s1a and s2a. The misregistration occurred as these sections are first images in the stack which caused difficulties in matching with the atlas close to the midline.\nThis animal also had a DY injection visible around section s5b, which was not included in the present data set due to extensive invasion of white matter as well as extensive fading by the time of plotting. A partial data set for this injection (label in frontal lobe) is illustrated in Figure 11 of Burman et al. 2006 (J Comp Neurol 495:149\u2013172).", "survival_days": 18, "perfusion_date": "1998-11-30", "injection_date": "1998-11-12", "id": "CJ36", "sex": "M"}, {"date_of_birth": "2014-02-07", "sectioning_plane": "coronal", "weight": 326, "memo": "This animal had 4 injections of tracers in part of the somatosensory and motor complex of areas. The histology presented here uses the cytochrome oxidase stain.", "survival_days": 17, "perfusion_date": "2016-06-02", "injection_date": "2016-05-16", "id": "CJ170", "sex": "M"}, {"date_of_birth": "2008-07-23", "sectioning_plane": "coronal", "weight": 318, "memo": "This animal had 4 injections in temporal cortex.", "survival_days": 14, "perfusion_date": "2011-06-15", "injection_date": "2011-06-01", "id": "CJ122", "sex": "M"}, {"date_of_birth": "2005-01-31", "sectioning_plane": "coronal", "weight": 412, "memo": "Animal was part of a study centred on the connections of the frontal pole cortex.", "survival_days": 14, "perfusion_date": "2006-08-08", "injection_date": "2006-07-25", "id": "CJ71R", "sex": "M"}, {"date_of_birth": "2006-03-26", "sectioning_plane": "coronal", "weight": 320, "memo": "This animal had 4 tracer injections in posterior parietal cortex but the FE injection was ineffective.", "survival_days": 20, "perfusion_date": "2007-09-03", "injection_date": "2007-08-14", "id": "CJ77", "sex": "M"}, {"date_of_birth": "2006-01-23", "sectioning_plane": "coronal", "weight": 400, "memo": "This case had 4 injections in the posterior parietal cortex. Only 1 section in 800 \u00b5m is used as the basis of the analysis shown here as the alternate series could not be plotted consistently due to histology artefacts in the fluorescence series.", "survival_days": 10, "perfusion_date": "2007-08-17", "injection_date": "2007-07-08", "id": "CJ76", "sex": "M"}, {"date_of_birth": "2006-03-11", "sectioning_plane": "coronal", "weight": 363, "memo": "This case was part of a series of experiments on the afferent connections of somatosensory and motor cortex.\n\nData on frontal lobe connections need to be interpreted with caution as there is a large ischemic damage to areas 8Ad and rostral part of 6DR in the hemisphere ipsilateral to the injections. This is most apparent between sections r11 and r18.", "survival_days": 14, "perfusion_date": "2009-10-27", "injection_date": "2009-10-13", "id": "CJ100", "sex": "F"}, {"date_of_birth": "2013-11-10", "sectioning_plane": "coronal", "weight": 340, "memo": "This animal had 3 effective injections in the frontal cortex. There was also a failed attempt to inject area 11 with CTB-red (track visible in section r6c).", "survival_days": 20, "perfusion_date": "2017-05-10", "injection_date": "2017-04-20", "id": "CJ801", "sex": "F"}, {"date_of_birth": "2014-03-15", "sectioning_plane": "coronal", "weight": 390, "memo": "This animal had 3 effective injections in the rostral visual cortex and superior temporal region.", "survival_days": 16, "perfusion_date": "2017-05-31", "injection_date": "2017-05-15", "id": "CJ182", "sex": "M"}, {"date_of_birth": "2006-04-07", "sectioning_plane": "coronal", "weight": 410, "memo": "This animal had injections directed to the posterior cingulate region. The right hemisphere (on the left of the images) had damage incurred during the surgery for injection but the injected hemisphere had no damage.", "survival_days": 13, "perfusion_date": "2007-12-12", "injection_date": "2007-11-29", "id": "CJ80", "sex": "M"}, {"date_of_birth": "2005-11-09", "sectioning_plane": "coronal", "weight": 390, "memo": "This case had 2 tracer injections in area V2. Note long survival time for transport.", "survival_days": 21, "perfusion_date": "2008-12-09", "injection_date": "2008-11-18", "id": "CJ90", "sex": "F"}, {"date_of_birth": "2012-12-11", "sectioning_plane": "coronal", "weight": 430, "memo": "This case had a single successful injection in the right hemisphere (DY).", "survival_days": 10, "perfusion_date": "2014-07-24", "injection_date": "2014-07-14", "id": "CJ148R", "sex": "F"}, {"date_of_birth": "2013-11-16", "sectioning_plane": "coronal", "weight": 359, "memo": "This animal had 4 injections in the frontal lobe. The cytoarchitectural analysis used the NeuN stain. The results in this case are not particularly clear at low power due to low differentiation, but the stain was successful and cytoarchitectural features can be analysed at high magnification.", "survival_days": 7, "perfusion_date": "2016-08-22", "injection_date": "2016-08-15", "id": "CJ800", "sex": "M"}, {"date_of_birth": "2014-02-12", "sectioning_plane": "coronal", "weight": 342, "memo": "This case had 3 good injections in the primary visual area (V1). A DY injection in the medial part of V1/ V2 was not analysed due to extensive invasion of the white matter (this injection is visible in section c6a).", "survival_days": 17, "perfusion_date": "2016-09-15", "injection_date": "2016-08-30", "id": "CJ174", "sex": "F"}, {"date_of_birth": "2013-09-09", "sectioning_plane": "coronal", "weight": 352, "memo": "This animal had 4 effective injections. There was some loss of ventral temporal lobe tissue due to an accident during histological processing, which is apparent between sections r11b and r21b. However, analysis of the detached segment of cortex showed few if any labeled neurones are likely to have been missed in the analysis of connections.", "survival_days": 22, "perfusion_date": "2017-05-24", "injection_date": "2017-05-02", "id": "CJ802", "sex": "M"}, {"date_of_birth": "2007-06-17", "sectioning_plane": "coronal", "weight": 357, "memo": "Note: injections were in left hemisphere, images are flipped for consistency with other cases.", "survival_days": 17, "perfusion_date": "2010-07-23", "injection_date": "2010-07-06", "id": "CJ110", "sex": "M"}, {"date_of_birth": "2007-06-26", "sectioning_plane": "coronal", "weight": 423, "memo": "This animal had 2 injections (FR and FE) in somatosensory/ motor cortex.", "survival_days": 17, "perfusion_date": "2010-09-10", "injection_date": "2010-08-24", "id": "CJ113", "sex": "M"}, {"date_of_birth": "2003-11-07", "sectioning_plane": "coronal", "weight": 303, "memo": "This case received 4 injections in the caudal temporal lobe. The DY injection (visible in section r15a) was not processed due to some loss of label near the junction of rostral and caudal blocks.", "survival_days": 14, "perfusion_date": "2005-04-14", "injection_date": "2005-03-31", "id": "CJ64", "sex": "M"}, {"date_of_birth": "2007-07-05", "sectioning_plane": "coronal", "weight": 409, "memo": "This animal had 2 injections (FR and FE) in somatosensory/ motor cortex.", "survival_days": 17, "perfusion_date": "2010-11-05", "injection_date": "2010-10-19", "id": "CJ114", "sex": "M"}, {"date_of_birth": "2007-12-24", "sectioning_plane": "coronal", "weight": 387, "memo": "This animal had 2 injections (FR and FE) in somatosensory/ motor cortex.", "survival_days": 17, "perfusion_date": "2010-12-10", "injection_date": "2010-11-23", "id": "CJ115", "sex": "F"}, {"date_of_birth": "2007-02-09", "sectioning_plane": "coronal", "weight": 530, "memo": "This animal had 2 injections (FR and FE) in subdivisions of the caudal frontal cortex, centred on subdivisions of the premotor cortex.", "survival_days": 17, "perfusion_date": "2011-10-21", "injection_date": "2011-10-04", "id": "CJ123", "sex": "F"}, {"date_of_birth": "2007-12-27", "sectioning_plane": "coronal", "weight": 339, "memo": "This animal had 2 injections (FR and FE) in somatosensory/ motor cortex.", "survival_days": 18, "perfusion_date": "2011-03-11", "injection_date": "2011-02-21", "id": "CJ116", "sex": "F"}, {"date_of_birth": "2014-01-29", "sectioning_plane": "coronal", "weight": 374, "memo": "This animal had 4 tracer injections in the temporal lobe.", "survival_days": 11, "perfusion_date": "2016-10-28", "injection_date": "2016-10-17", "id": "CJ180", "sex": "M"}, {"date_of_birth": "2014-09-26", "sectioning_plane": "coronal", "weight": 368, "memo": "This animal had 2 sets of injections, in the prefrontal cortex and temporal lobe.", "survival_days": 17, "perfusion_date": "2016-12-15", "injection_date": "2016-11-28", "id": "CJ181", "sex": "M"}, {"date_of_birth": "2005-10-15", "sectioning_plane": "coronal", "weight": 389, "memo": "This animal was part of a study on the connections of the rostral prefrontal cortex. It had 4 tracer injections.", "survival_days": 14, "perfusion_date": "2007-03-27", "injection_date": "2007-03-13", "id": "CJ73X", "sex": "M"}, {"date_of_birth": "2006-01-23", "sectioning_plane": "coronal", "weight": 356, "memo": "Case with 2 good injections (FR and DY). There was ischemic damage to the dorsal surface.", "survival_days": 10, "perfusion_date": "2007-06-15", "injection_date": "2007-06-05", "id": "CJ75X", "sex": "M"}, {"date_of_birth": "2014-05-31", "sectioning_plane": "coronal", "weight": 340, "memo": "This animal had 4 effective injections in areas involved in somatic sensation and motor control. The histological sections presented are stained for cytochrome oxidase. \nThere was loss of tissue in the ventral temporal cortex due to an accident during sectioning. The sections illustrated show \"padding\" of this part of the brain (digital manipulation), which was necessary to enable registration to template. Users are advised to ignore the histology in this part of the brain.", "survival_days": 18, "perfusion_date": "2016-06-17", "injection_date": "2016-05-30", "id": "CJ173", "sex": "M"}, {"date_of_birth": "2014-02-05", "sectioning_plane": "coronal", "weight": 390, "memo": "This animal had 4 effective injections in the motor/ premotor complex of areas, all including the midline. Histology was done using a neuron-specific (NeuN) staining instead of Nissl. The results were rather pleasing.", "survival_days": 16, "perfusion_date": "2016-05-11", "injection_date": "2016-04-26", "id": "CJ167", "sex": "F"}, {"date_of_birth": "2007-06-17", "sectioning_plane": "coronal", "weight": 334, "memo": "This animal had 2 injections (FR and FE) in somatosensory/ motor cortex.", "survival_days": 17, "perfusion_date": "2010-07-30", "injection_date": "2010-07-13", "id": "CJ111", "sex": "M"}, {"date_of_birth": "2004-12-03", "sectioning_plane": "coronal", "weight": 305, "memo": "This animal was part of a study on the connections of prefrontal cortex. It received 4 injections, but the FE injection in the rostral part of area 47L resulted in too few labeled neurones, hence not being suitable for quantitative analyses.", "survival_days": 11, "perfusion_date": "2006-04-10", "injection_date": "2006-03-30", "id": "CJ70X", "sex": "M"}, {"date_of_birth": "2014-04-06", "sectioning_plane": "coronal", "weight": 324, "memo": "This animal had 4 injections in the medial frontal lobe: FB and DY in the left hemisphere and CTB (red and green) in the right. The injections reconstructed here are the FB and DY (images were flipped so injections appear on the right, to facilitate comparison with other cars). \n\nThis animal also underwent electrophysiological recordings in extrastriate cortex. This resulted in some herniation and electrode tracks, visible for example in the neighbourhood of section c26b.", "survival_days": 17, "perfusion_date": "2015-11-19", "injection_date": "2015-11-02", "id": "CJ163", "sex": "F"}, {"date_of_birth": "2013-05-10", "sectioning_plane": "coronal", "weight": 336, "memo": "This animal had injections in both hemispheres but results were of unequal quality.", "survival_days": 8, "perfusion_date": "2014-12-10", "injection_date": "2014-12-02", "id": "CJ153X", "sex": "F"}], "total_cases": 54}